STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ47424.1Regulator of protease activity HflC, stomatin/prohibitin superfamily. (312 aa)    
Predicted Functional Partners:
SJZ56518.1
Cell division protease FtsH.
  
 0.999
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.742
mtaD
5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
      0.739
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.728
SJZ50235.1
Ca2+-transporting ATPase.
   
 0.590
SJZ56849.1
YidC/Oxa1 family membrane protein insertase.
  
 
 0.526
SJZ47181.1
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
  
 0.505
SJZ48467.1
Cardiolipin synthase.
    
 0.497
SJZ47408.1
HNH endonuclease.
       0.464
SJZ40430.1
DNA polymerase-1.
  
  
 0.442
Your Current Organism:
Mycoplasma verecundum
NCBI taxonomy Id: 171291
Other names: ATCC 27862, M. verecundum, NCTC 10145
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