STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ50272.1DNA-binding transcriptional regulator, IscR family. (157 aa)    
Predicted Functional Partners:
SJZ50255.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
     
 0.803
SJZ40791.1
Nitrogen fixation protein NifU.
  
  
 0.516
rpmG
Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.462
SJZ50307.1
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
       0.453
nusG
Transcriptional antiterminator NusG; Participates in transcription elongation, termination and antitermination.
     
 0.441
Your Current Organism:
Mycoplasma verecundum
NCBI taxonomy Id: 171291
Other names: ATCC 27862, M. verecundum, NCTC 10145
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.