Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ40430.1 | SJZ51820.1 | SAMN02745154_00009 | SAMN02745154_00394 | DNA polymerase-1. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.806 |
SJZ40430.1 | SJZ54095.1 | SAMN02745154_00009 | SAMN02745154_00451 | DNA polymerase-1. | tRNA-binding protein. | 0.563 |
SJZ40430.1 | metG | SAMN02745154_00009 | SAMN02745154_00484 | DNA polymerase-1. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.878 |
SJZ40430.1 | pheT | SAMN02745154_00009 | SAMN02745154_00068 | DNA polymerase-1. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.876 |
SJZ40430.1 | topA | SAMN02745154_00009 | SAMN02745154_00391 | DNA polymerase-1. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.994 |
SJZ40430.1 | tsaD | SAMN02745154_00009 | SAMN02745154_00455 | DNA polymerase-1. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.588 |
SJZ51820.1 | SJZ40430.1 | SAMN02745154_00394 | SAMN02745154_00009 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA polymerase-1. | 0.806 |
SJZ51820.1 | metG | SAMN02745154_00394 | SAMN02745154_00484 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.998 |
SJZ51820.1 | pheT | SAMN02745154_00394 | SAMN02745154_00068 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.982 |
SJZ51820.1 | topA | SAMN02745154_00394 | SAMN02745154_00391 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.999 |
SJZ51820.1 | tsaD | SAMN02745154_00394 | SAMN02745154_00455 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.535 |
SJZ51820.1 | tyrS | SAMN02745154_00394 | SAMN02745154_00450 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.627 |
SJZ54095.1 | SJZ40430.1 | SAMN02745154_00451 | SAMN02745154_00009 | tRNA-binding protein. | DNA polymerase-1. | 0.563 |
SJZ54095.1 | SJZ54105.1 | SAMN02745154_00451 | SAMN02745154_00452 | tRNA-binding protein. | EDD domain protein, DegV family. | 0.613 |
SJZ54095.1 | SJZ54126.1 | SAMN02745154_00451 | SAMN02745154_00453 | tRNA-binding protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.574 |
SJZ54095.1 | SJZ54147.1 | SAMN02745154_00451 | SAMN02745154_00454 | tRNA-binding protein. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.598 |
SJZ54095.1 | metG | SAMN02745154_00451 | SAMN02745154_00484 | tRNA-binding protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.471 |
SJZ54095.1 | pheT | SAMN02745154_00451 | SAMN02745154_00068 | tRNA-binding protein. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.968 |
SJZ54095.1 | topA | SAMN02745154_00451 | SAMN02745154_00391 | tRNA-binding protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.457 |
SJZ54095.1 | tsaD | SAMN02745154_00451 | SAMN02745154_00455 | tRNA-binding protein. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.588 |
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