STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66607.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SJZ43037.1
Protein of unknown function.
 
     0.791
SJZ40924.1
Spermidine/putrescine transport system substrate-binding protein.
  
     0.767
SJZ50578.1
Hypothetical protein.
 
     0.767
SJZ52840.1
Spermidine/putrescine transport system substrate-binding protein.
  
     0.763
SJZ64495.1
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.
  
     0.747
SJZ65375.1
GDSL-like Lipase/Acylhydrolase family protein.
  
     0.744
SJZ43154.1
Hypothetical protein.
  
     0.714
SJZ47498.1
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.676
SJZ66635.1
Phosphomevalonate kinase.
       0.658
SJZ53382.1
Superfamily I DNA and/or RNA helicase.
  
     0.644
Your Current Organism:
Mycoplasma verecundum
NCBI taxonomy Id: 171291
Other names: ATCC 27862, M. verecundum, NCTC 10145
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