Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ40924.1 | SJZ43037.1 | SAMN02745154_00025 | SAMN02745154_00091 | Spermidine/putrescine transport system substrate-binding protein. | Protein of unknown function. | 0.771 |
SJZ40924.1 | SJZ43154.1 | SAMN02745154_00025 | SAMN02745154_00095 | Spermidine/putrescine transport system substrate-binding protein. | Hypothetical protein. | 0.766 |
SJZ40924.1 | SJZ47498.1 | SAMN02745154_00025 | SAMN02745154_00252 | Spermidine/putrescine transport system substrate-binding protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.766 |
SJZ40924.1 | SJZ50578.1 | SAMN02745154_00025 | SAMN02745154_00355 | Spermidine/putrescine transport system substrate-binding protein. | Hypothetical protein. | 0.773 |
SJZ40924.1 | SJZ53382.1 | SAMN02745154_00025 | SAMN02745154_00431 | Spermidine/putrescine transport system substrate-binding protein. | Superfamily I DNA and/or RNA helicase. | 0.442 |
SJZ40924.1 | SJZ64495.1 | SAMN02745154_00025 | SAMN02745154_00674 | Spermidine/putrescine transport system substrate-binding protein. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins. | 0.773 |
SJZ40924.1 | SJZ65375.1 | SAMN02745154_00025 | SAMN02745154_00696 | Spermidine/putrescine transport system substrate-binding protein. | GDSL-like Lipase/Acylhydrolase family protein. | 0.768 |
SJZ40924.1 | SJZ66607.1 | SAMN02745154_00025 | SAMN02745154_00709 | Spermidine/putrescine transport system substrate-binding protein. | Hypothetical protein. | 0.767 |
SJZ43037.1 | SJZ40924.1 | SAMN02745154_00091 | SAMN02745154_00025 | Protein of unknown function. | Spermidine/putrescine transport system substrate-binding protein. | 0.771 |
SJZ43037.1 | SJZ43154.1 | SAMN02745154_00091 | SAMN02745154_00095 | Protein of unknown function. | Hypothetical protein. | 0.534 |
SJZ43037.1 | SJZ47498.1 | SAMN02745154_00091 | SAMN02745154_00252 | Protein of unknown function. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.766 |
SJZ43037.1 | SJZ50578.1 | SAMN02745154_00091 | SAMN02745154_00355 | Protein of unknown function. | Hypothetical protein. | 0.772 |
SJZ43037.1 | SJZ52840.1 | SAMN02745154_00091 | SAMN02745154_00419 | Protein of unknown function. | Spermidine/putrescine transport system substrate-binding protein. | 0.773 |
SJZ43037.1 | SJZ64495.1 | SAMN02745154_00091 | SAMN02745154_00674 | Protein of unknown function. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins. | 0.634 |
SJZ43037.1 | SJZ65375.1 | SAMN02745154_00091 | SAMN02745154_00696 | Protein of unknown function. | GDSL-like Lipase/Acylhydrolase family protein. | 0.774 |
SJZ43037.1 | SJZ66607.1 | SAMN02745154_00091 | SAMN02745154_00709 | Protein of unknown function. | Hypothetical protein. | 0.791 |
SJZ43154.1 | SJZ40924.1 | SAMN02745154_00095 | SAMN02745154_00025 | Hypothetical protein. | Spermidine/putrescine transport system substrate-binding protein. | 0.766 |
SJZ43154.1 | SJZ43037.1 | SAMN02745154_00095 | SAMN02745154_00091 | Hypothetical protein. | Protein of unknown function. | 0.534 |
SJZ43154.1 | SJZ47498.1 | SAMN02745154_00095 | SAMN02745154_00252 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.763 |
SJZ43154.1 | SJZ50578.1 | SAMN02745154_00095 | SAMN02745154_00355 | Hypothetical protein. | Hypothetical protein. | 0.606 |
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