STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCUnannotated protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa)    
Predicted Functional Partners:
EQW78_02235
Unannotated protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
  
 0.863
dtd
Unannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.801
EQW78_02245
Unannotated protein.
       0.784
EQW78_02250
Unannotated protein.
       0.762
EQW78_11230
Unannotated protein.
  
     0.557
EQW78_16120
Unannotated protein.
  
     0.476
EQW78_02230
Unannotated protein.
       0.463
EQW78_15215
Unannotated protein.
  
   
 0.457
cofC
Unannotated protein.
  
     0.434
GCA_000718325_02140
Unannotated protein.
  
     0.419
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 13506, IFO 15015, JCM 3160, LMG 4072, LMG:4072, NBRC 15015, NCIB 10587, NCIB:10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, strain 891, strain rskov 27
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