STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQW78_16400Unannotated protein. (443 aa)    
Predicted Functional Partners:
EQW78_16405
Unannotated protein.
 
     0.656
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.599
EQW78_16390
Unannotated protein.
       0.548
EQW78_16395
Unannotated protein.
       0.548
EQW78_11530
Unannotated protein.
  
   
 0.522
glgE
Unannotated protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.455
treS
Unannotated protein.
    
  0.455
pulA
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
    
  0.455
EQW78_00245
Unannotated protein.
    
  0.455
EQW78_00220
Unannotated protein.
    
  0.455
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 13506, IFO 15015, JCM 3160, LMG 4072, LMG:4072, NBRC 15015, NCIB 10587, NCIB:10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, strain 891, strain rskov 27
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