STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOO06526.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)    
Predicted Functional Partners:
KOO06522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.942
KOO06958.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.917
KOO06524.1
Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
KOO06527.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.873
KOO06519.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
KOO06528.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.810
KOO06516.1
Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
KOO06517.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
KOO06515.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
KOO06525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.797
Your Current Organism:
Vibrio hepatarius
NCBI taxonomy Id: 171383
Other names: CAIM 693, DSM 19134, LMG 20362, LMG:20362, V. hepatarius, Vibrio hepatarius Thompson et al. 2003, Vibrio sp. LMG 20362, strain 1P, strain P62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.