STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOO06015.1Conjugative transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
KOO06014.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
KOO06016.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
KOO06017.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
KOO06012.1
Zinc peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
KOO06013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
Your Current Organism:
Vibrio hepatarius
NCBI taxonomy Id: 171383
Other names: CAIM 693, DSM 19134, LMG 20362, LMG:20362, V. hepatarius, Vibrio hepatarius Thompson et al. 2003, Vibrio sp. LMG 20362, strain 1P, strain P62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.