STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OES45672.1Acetamidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
OES45304.1
ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.787
OES45095.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.722
OES45078.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.717
gatA
aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
 
 
 0.529
OES44806.1
Arylformamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.528
OES46743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.508
OES46659.1
Acetamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
OES46098.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.482
OES45197.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.448
OES44425.1
methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.444
Your Current Organism:
Domibacillus iocasae
NCBI taxonomy Id: 1714016
Other names: CCTCC AB 2015183, D. iocasae, DSM 29979, Domibacillus iocasae Sun and Sun 2016, Domibacillus sp. S6, strain S6
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