STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OES43990.1Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
OES44002.1
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
OES44001.1
Sporulation protein YhbH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
 
  
 0.971
OES43989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.616
OES43832.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
OES43550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
OES43991.1
Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
OES43536.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.501
OES45042.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.488
OES45995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.424
OES46518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.408
Your Current Organism:
Domibacillus iocasae
NCBI taxonomy Id: 1714016
Other names: CCTCC AB 2015183, D. iocasae, DSM 29979, Domibacillus iocasae Sun and Sun 2016, Domibacillus sp. S6, strain S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.