STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OES43378.1Type IV secretion system protein VirB4; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)    
Predicted Functional Partners:
OES43371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.889
OES43368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.886
OES43357.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.836
OES43358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.833
OES43365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.828
OES43363.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.648
OES43364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.648
OES43366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.646
OES45381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.639
OES43367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
Your Current Organism:
Domibacillus iocasae
NCBI taxonomy Id: 1714016
Other names: CCTCC AB 2015183, D. iocasae, DSM 29979, Domibacillus iocasae Sun and Sun 2016, Domibacillus sp. S6, strain S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.