STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OES45919.1N-acetylmuramoyl-L-alanine amidase CwlD; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
OES46208.1
DUF4367 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.846
OES44907.1
Stage II sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.778
OES45918.1
Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.619
rpsI
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.
       0.590
OES44660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.583
OES45119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.580
OES44918.1
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.580
OES46478.1
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.575
OES46125.1
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.552
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.542
Your Current Organism:
Domibacillus iocasae
NCBI taxonomy Id: 1714016
Other names: CCTCC AB 2015183, D. iocasae, DSM 29979, Domibacillus iocasae Sun and Sun 2016, Domibacillus sp. S6, strain S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.