STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528745_04796Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_001528745_03759
Unannotated protein.
 
 
 0.999
GCA_001528745_01452
Unannotated protein.
  
 0.998
GCA_001528745_00353
Unannotated protein.
 
  
 0.963
GCA_001528745_00039
Unannotated protein.
     
 0.896
GCA_001528745_01467
Unannotated protein.
    
  0.881
GCA_001528745_02597
Unannotated protein.
     
 0.879
GCA_001528745_03244
Unannotated protein.
     
 0.879
GCA_001528745_01924
Unannotated protein.
     
 0.875
GCA_001528745_03933
Unannotated protein.
     0.753
GCA_001528745_02526
Unannotated protein.
  
 0.644
Your Current Organism:
Marinobacterium profundum
NCBI taxonomy Id: 1714300
Other names: JCM 30410, KCCM 43095, M. profundum, Marinobacterium profundum Hwang et al. 2016, Marinobacterium sp. PAMC 27536, strain PAMC 27536
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.