STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspAPhosphoserine phosphatase 1. (194 aa)    
Predicted Functional Partners:
CUK13041.1
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
 
     0.946
kanE
Glycosyltransferase KanE.
 
   
 0.938
CUK13008.1
Putative glycosyl transferase.
 
     0.936
CUK13048.1
Putative glycosyl transferase.
 
    0.931
CUK13055.1
S-adenosyl-L-methionine methyltransferase.
 
     0.929
pimB_2
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
 
   
 0.926
cobS_2
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.810
ykuT
Putative MscS family protein YkuT.
 
     0.796
yheH
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheH.
 
 
 
 0.732
CUJ97400.1
Putative multidrug export ATP-binding/permease protein.
 
 
 
 0.725
Your Current Organism:
Ruegeria denitrificans
NCBI taxonomy Id: 1715692
Other names: CECT 5091, LMG 29896, LMG:29896, R. denitrificans, Ruegeria sp. CECT 5091, strain 5OM10
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