STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL47274.1NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
KPL45713.1
N-ethylmaleimide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.740
KPL46058.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.724
KPL46079.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.724
KPL47297.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.624
KPL46073.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.624
KPL45185.1
Glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.590
KPL46838.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.575
KPL46873.1
Pirin domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.544
Mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.514
KPL46912.1
Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.493
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.