STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL47250.1Nucleoside diphosphate kinase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
rps10p
30S ribosomal protein S10; Involved in binding tRNA to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KPL45362.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
KPL47292.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
KPL47019.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
KPL45482.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
KPL45361.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
KPL45499.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.989
KPL45494.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
KPL45490.1
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.960
pyrG
CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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