STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL47212.1Aldehyde:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
KPL46613.1
Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.661
KPL46595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
KPL45703.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.604
KPL46723.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
MoaA
Cyclic pyranopterin phosphate synthase MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.519
KPL47206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
KPL45095.1
Pyrroloquinoline quinone biosynthesis protein PqqE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
KPL46996.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.441
KPL47078.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.432
AOB57_00750
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.