STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL46910.1Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
KPL46497.1
Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
Ppk1
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
KPL46879.1
ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46968.1
ATP synthase F0F1 subunit epsilon; Part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46880.1
ATP synthase F0F1 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46881.1
ATP synthase F0F1 subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46882.1
ATP synthase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46883.1
ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL46884.1
ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
KPL45694.1
Produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.650
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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