STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL46513.1Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)    
Predicted Functional Partners:
KPL45945.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
HdrC
Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.554
KPL46265.1
Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.521
GltA
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.503
KPL46785.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.475
KPL46264.1
Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.466
KPL46131.1
Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the formation of 3-phospho-D-glycerol phosphate from D-glyceraldehyde 3-phosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.433
KPL46181.1
Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.426
HdrB
Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.426
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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