STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL46298.1Glucan 1,4-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)    
Predicted Functional Partners:
KPL45205.1
Alpha-amlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.540
KPL45204.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.522
KPL45678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.502
KPL45712.1
Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.437
KPL46147.1
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.433
KPL47315.1
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.431
PstA
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.