STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL46363.1Deoxyribonucleotide triphosphate pyrophosphatase; HAM1-like protein;i t is suspected that this protein functions to remove nonstandard bases such as xanthine or inosine; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
GuaA
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
KPL44932.1
GMP synthase; Type-1 glutamine amidotransferase domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
KPL47250.1
Nucleoside diphosphate kinase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
SurE
Stationary phase survival protein SurE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
KPL46362.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
KPL46231.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
KPL45640.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
KPL45780.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.666
KPL45711.1
Adenylosuccinate synthetase; Catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.659
nusG
Transcription antiterminator NusG; Modulates Rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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