STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOB57_13695PDZ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)    
Predicted Functional Partners:
KPL45973.1
Metal-dependent protease of the PAD1/JAB1 superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
dnaK
Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.887
KPL45708.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
KPL45103.1
Nucleotidase; Required for the ATP-dependent degradation of proteins by the 20S proteasome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
KPL45905.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.841
KPL46221.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.826
KPL46877.1
Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.809
KPL47221.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
KPL44840.1
D-tyrosyl-tRNA(Tyr) deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.799
KPL46171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.786
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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