STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL44747.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (637 aa)    
Predicted Functional Partners:
KPL46835.1
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
PsmB
Proteasome subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.675
gltX
glutamine--tRNA ligase; Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
KPL45941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
KPL44743.1
NMD protein affecting ribosome stability and mRNA decay; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.413
KPL47080.1
50S ribosomal protein L18e; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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