STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH12074.1Metal-dependent hydrolase. (274 aa)    
Predicted Functional Partners:
OAH12076.1
Membrane protein of unknown function.
 
     0.889
OAH12073.1
Hypothetical protein.
       0.887
OAH12075.1
Hypothetical protein.
       0.789
osmC
Peroxiredoxin OsmC.
       0.660
srfAA_2
Surfactin synthase subunit 1.
  
  
 0.546
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.515
OAH12015.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.448
Your Current Organism:
Streptomyces jeddahensis
NCBI taxonomy Id: 1716141
Other names: DSM 101878, LMG 29545, LMG:29545, NCCB 100603, S. jeddahensis, Streptomyces jeddahensis Rottig et al. 2017, Streptomyces sp. G25(2015), strain G25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.