STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAH11062.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.966
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 
 0.951
OAH16056.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
   
 
 0.946
OAH11836.1
R3H domain protein.
   
   0.839
OAH14783.1
Hypothetical protein; Belongs to the UPF0109 family.
    
   0.825
rhlE_1
ATP-dependent RNA helicase RhlE.
    
 
 0.694
OAH15402.1
Hypothetical protein.
    
 
 0.694
rhlE_2
ATP-dependent RNA helicase RhlE.
    
 
 0.694
rhlE_3
ATP-dependent RNA helicase RhlE.
    
 
 0.694
OAH13788.1
Hypothetical protein.
    
 
 0.694
Your Current Organism:
Streptomyces jeddahensis
NCBI taxonomy Id: 1716141
Other names: DSM 101878, LMG 29545, LMG:29545, NCCB 100603, S. jeddahensis, Streptomyces jeddahensis Rottig et al. 2017, Streptomyces sp. G25(2015), strain G25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.