STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO02348.1Cysteine-rich secretory protein family protein. (362 aa)    
Predicted Functional Partners:
CDO02346.1
Hypothetical protein.
 
     0.709
CDO02347.1
Hypothetical protein.
 
     0.692
CDO02349.1
YugN-like family protein.
       0.547
CDO02345.1
Hypothetical protein; Belongs to the UPF0342 family.
 
     0.544
CDO04397.1
Hypothetical protein.
   
    0.532
CDO01667.1
Putative sporulation protein YtxC.
  
     0.503
CDO04437.1
Hypothetical protein.
  
     0.498
pyrK
Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
  0.427
vanW
Vancomycin B-type resistance protein VanW.
  
     0.424
CDO03057.1
Spore coat protein YutH.
  
     0.416
Your Current Organism:
Oceanobacillus picturae
NCBI taxonomy Id: 171693
Other names: DSM 14867, KCTC 3821, LMG 19492, LMG:19492, O. picturae, Oceanobacillus picturae (Heyrman et al. 2003) Lee et al. 2006, Virgibacillus picturae, Virgibacillus picturae Heyrman et al. 2003
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.