STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO03124.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
dnaC_1
DNA replication protein DnaC.
       0.773
CDO03126.1
Hypothetical protein.
       0.773
CDO03127.1
Hypothetical protein; Conserved phage C-terminus (Phg_2220_C).
       0.752
CDO03128.1
Phage regulatory protein, Rha family.
       0.513
CDO03129.1
Hypothetical protein.
       0.513
CDO03122.1
Hypothetical protein.
       0.463
CDO03123.1
Hypothetical protein.
       0.463
CDO03120.1
Hypothetical protein.
       0.422
CDO03121.1
Nucleoside triphosphate pyrophosphohydrolase.
       0.422
CDO03119.1
Hypothetical protein.
       0.417
Your Current Organism:
Oceanobacillus picturae
NCBI taxonomy Id: 171693
Other names: DSM 14867, KCTC 3821, LMG 19492, LMG:19492, O. picturae, Oceanobacillus picturae (Heyrman et al. 2003) Lee et al. 2006, Virgibacillus picturae, Virgibacillus picturae Heyrman et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.