STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCopper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (230 aa)    
Predicted Functional Partners:
nagB
Glucosamine-6-phosphate deaminase 1; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
   
 0.617
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.610
pgl
6-phosphogluconolactonase.
 
    0.574
ptsG
EIICBA-Glc.
 
   
 0.572
nagC_2
N-acetylglucosamine repressor.
   
 0.488
glcK
Glucokinase.
     0.446
CDO03581.1
Putative integral membrane protein.
       0.446
cadA_1
Putative cadmium-transporting ATPase.
     
 0.440
cadA_2
Putative cadmium-transporting ATPase.
     
 0.440
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
     0.438
Your Current Organism:
Oceanobacillus picturae
NCBI taxonomy Id: 171693
Other names: DSM 14867, KCTC 3821, LMG 19492, LMG:19492, O. picturae, Oceanobacillus picturae (Heyrman et al. 2003) Lee et al. 2006, Virgibacillus picturae, Virgibacillus picturae Heyrman et al. 2003
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