Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO04780.1 | CDO04783.1 | BN988_03347 | BN988_03350 | Hypothetical protein. | Hypothetical protein. | 0.415 |
CDO04780.1 | ytrB_5 | BN988_03347 | BN988_03349 | Hypothetical protein. | ABC transporter ATP-binding protein YtrB. | 0.415 |
CDO04780.1 | yvoA_4 | BN988_03347 | BN988_03348 | Hypothetical protein. | HTH-type transcriptional repressor YvoA. | 0.415 |
CDO04783.1 | CDO04780.1 | BN988_03350 | BN988_03347 | Hypothetical protein. | Hypothetical protein. | 0.415 |
CDO04783.1 | ytrB_5 | BN988_03350 | BN988_03349 | Hypothetical protein. | ABC transporter ATP-binding protein YtrB. | 0.915 |
CDO04783.1 | yvoA_4 | BN988_03350 | BN988_03348 | Hypothetical protein. | HTH-type transcriptional repressor YvoA. | 0.833 |
ytrA_2 | ytrB_1 | BN988_02515 | BN988_02461 | HTH-type transcriptional repressor YtrA. | ABC transporter ATP-binding protein YtrB. | 0.632 |
ytrA_2 | ytrB_3 | BN988_02515 | BN988_03007 | HTH-type transcriptional repressor YtrA. | ABC transporter ATP-binding protein YtrB. | 0.695 |
ytrA_2 | yvoA_4 | BN988_02515 | BN988_03348 | HTH-type transcriptional repressor YtrA. | HTH-type transcriptional repressor YvoA. | 0.477 |
ytrB_1 | ytrA_2 | BN988_02461 | BN988_02515 | ABC transporter ATP-binding protein YtrB. | HTH-type transcriptional repressor YtrA. | 0.632 |
ytrB_1 | yvoA_4 | BN988_02461 | BN988_03348 | ABC transporter ATP-binding protein YtrB. | HTH-type transcriptional repressor YvoA. | 0.789 |
ytrB_3 | ytrA_2 | BN988_03007 | BN988_02515 | ABC transporter ATP-binding protein YtrB. | HTH-type transcriptional repressor YtrA. | 0.695 |
ytrB_3 | yvoA_4 | BN988_03007 | BN988_03348 | ABC transporter ATP-binding protein YtrB. | HTH-type transcriptional repressor YvoA. | 0.797 |
ytrB_5 | CDO04780.1 | BN988_03349 | BN988_03347 | ABC transporter ATP-binding protein YtrB. | Hypothetical protein. | 0.415 |
ytrB_5 | CDO04783.1 | BN988_03349 | BN988_03350 | ABC transporter ATP-binding protein YtrB. | Hypothetical protein. | 0.915 |
ytrB_5 | yvoA_4 | BN988_03349 | BN988_03348 | ABC transporter ATP-binding protein YtrB. | HTH-type transcriptional repressor YvoA. | 0.949 |
yvoA_4 | CDO04780.1 | BN988_03348 | BN988_03347 | HTH-type transcriptional repressor YvoA. | Hypothetical protein. | 0.415 |
yvoA_4 | CDO04783.1 | BN988_03348 | BN988_03350 | HTH-type transcriptional repressor YvoA. | Hypothetical protein. | 0.833 |
yvoA_4 | ytrA_2 | BN988_03348 | BN988_02515 | HTH-type transcriptional repressor YvoA. | HTH-type transcriptional repressor YtrA. | 0.477 |
yvoA_4 | ytrB_1 | BN988_03348 | BN988_02461 | HTH-type transcriptional repressor YvoA. | ABC transporter ATP-binding protein YtrB. | 0.789 |
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