STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078305_00609Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_900078305_01306
Unannotated protein.
  
 0.992
GCA_900078305_00610
Unannotated protein.
       0.839
GCA_900078305_00613
Unannotated protein.
  
 
  0.775
GCA_900078305_00611
Unannotated protein.
  
    0.740
GCA_900078305_00612
Unannotated protein.
  
    0.740
GCA_900078305_02129
Unannotated protein.
  
 0.710
GCA_900078305_00942
Unannotated protein.
   
 
 0.670
GCA_900078305_00371
Unannotated protein.
    
  0.655
GCA_900078305_00675
Unannotated protein.
    
  0.655
GCA_900078305_01537
Unannotated protein.
    
  0.655
Your Current Organism:
Corynebacterium bouchesdurhonense
NCBI taxonomy Id: 1720192
Other names: C. bouchesdurhonense, CSUR P2067, Corynebacterium sp. SN14, DSM:100846, strain Marseille-P2067, strain SN14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.