STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001517625_02925Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_001517625_02923
Unannotated protein.
 
 0.999
GCA_001517625_02924
Unannotated protein.
 0.999
GCA_001517625_02926
Unannotated protein.
 
 0.999
GCA_001517625_00612
Unannotated protein.
  
 
 0.935
GCA_001517625_01036
Unannotated protein.
  
    0.934
GCA_001517625_00077
Unannotated protein.
     
 0.720
GCA_001517625_01744
Unannotated protein.
     
 0.720
GCA_001517625_02988
Unannotated protein.
     
 0.720
GCA_001517625_00284
Unannotated protein.
   
    0.706
GCA_001517625_01419
Unannotated protein.
   
    0.706
Your Current Organism:
Clostridium sp. AT4
NCBI taxonomy Id: 1720194
Other names: C. sp. AT4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.