STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001487125_01307Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_001487125_00933
Unannotated protein.
   
 
 0.993
GCA_001487125_00391
Unannotated protein.
   
 0.940
GCA_001487125_00580
Unannotated protein.
   
 0.900
GCA_001487125_00024
Unannotated protein.
    
 0.895
GCA_001487125_02112
Unannotated protein.
    
  0.872
GCA_001487125_01426
Unannotated protein.
  
 0.870
GCA_001487125_00728
Unannotated protein.
  
 0.865
GCA_001487125_02182
Unannotated protein.
    
 0.862
GCA_001487125_00927
Unannotated protein.
   
  0.839
GCA_001487125_01075
Unannotated protein.
  
 
 0.788
Your Current Organism:
Gabonibacter massiliensis
NCBI taxonomy Id: 1720195
Other names: CSUR P2336, DSM 101039, G. massiliensis, Gabonibacter massiliensis Mourembou et al. 2017, Sanguibacteroides sp. GM7, strain GM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.