STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001487125_02081Unannotated protein. (147 aa)    
Predicted Functional Partners:
GCA_001487125_02083
Unannotated protein.
       0.617
GCA_001487125_02082
Unannotated protein.
       0.610
GCA_001487125_02087
Unannotated protein.
 
     0.510
GCA_001487125_02084
Unannotated protein.
       0.471
GCA_001487125_02085
Unannotated protein.
       0.459
GCA_001487125_02086
Unannotated protein.
       0.459
GCA_001487125_02088
Unannotated protein.
       0.430
GCA_001487125_01555
Unannotated protein.
 
     0.411
Your Current Organism:
Gabonibacter massiliensis
NCBI taxonomy Id: 1720195
Other names: CSUR P2336, DSM 101039, G. massiliensis, Gabonibacter massiliensis Mourembou et al. 2017, Sanguibacteroides sp. GM7, strain GM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.