STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001487145_00320Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_001487145_00554
Unannotated protein.
  
 
 0.919
GCA_001487145_00321
Unannotated protein.
       0.809
GCA_001487145_01416
Unannotated protein.
 
  
  0.609
GCA_001487145_00319
Unannotated protein.
  
    0.534
GCA_001487145_00545
Unannotated protein.
 
  
 0.526
GCA_001487145_01280
Unannotated protein.
  
 
  0.472
GCA_001487145_01414
Unannotated protein.
  
 
 0.464
GCA_001487145_01331
Unannotated protein.
  
 
 0.457
GCA_001487145_01005
Unannotated protein.
    
  0.451
GCA_001487145_01081
Unannotated protein.
   
 
  0.447
Your Current Organism:
Anaerococcus rubeinfantis
NCBI taxonomy Id: 1720199
Other names: A. rubeinfantis, Anaerococcus rubeinfantis corrig. Tidjani Alou et al. 2017, Anaerococcus rubiinfantis, Anaerococcus sp. mt16, CSUR P2032, DSM 101186, strain mt16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.