STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001487145_00512Unannotated protein. (314 aa)    
Predicted Functional Partners:
GCA_001487145_01193
Unannotated protein.
  
    0.774
GCA_001487145_00378
Unannotated protein.
  
 
 0.758
GCA_001487145_01028
Unannotated protein.
  
 0.735
GCA_001487145_01232
Unannotated protein.
  
 0.735
GCA_001487145_00779
Unannotated protein.
    
 0.733
GCA_001487145_00780
Unannotated protein.
    
 0.733
GCA_001487145_00814
Unannotated protein.
  
 
 0.724
GCA_001487145_00781
Unannotated protein.
    
 0.719
GCA_001487145_01121
Unannotated protein.
    
 0.719
GCA_001487145_01176
Unannotated protein.
 
     0.702
Your Current Organism:
Anaerococcus rubeinfantis
NCBI taxonomy Id: 1720199
Other names: A. rubeinfantis, Anaerococcus rubeinfantis corrig. Tidjani Alou et al. 2017, Anaerococcus rubiinfantis, Anaerococcus sp. mt16, CSUR P2032, DSM 101186, strain mt16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.