STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078395_00114Unannotated protein. (336 aa)    
Predicted Functional Partners:
GCA_900078395_00115
Unannotated protein.
 
  
 0.958
GCA_900078395_02701
Unannotated protein.
  
 
 0.930
GCA_900078395_00113
Unannotated protein.
 
     0.908
GCA_900078395_02927
Unannotated protein.
  
 
 0.890
GCA_900078395_00117
Unannotated protein.
 
 
 0.871
GCA_900078395_02855
Unannotated protein.
 
 
 0.863
GCA_900078395_02833
Unannotated protein.
  
  
0.853
GCA_900078395_01427
Unannotated protein.
  
 
 0.802
GCA_900078395_00118
Unannotated protein.
 
     0.773
GCA_900078395_02183
Unannotated protein.
  
    0.742
Your Current Organism:
Anaerotruncus rubiinfantis
NCBI taxonomy Id: 1720200
Other names: A. rubiinfantis, Anaerotruncus sp. MT15, CSUR P2276, strain MT15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.