STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078395_03008Unannotated protein. (551 aa)    
Predicted Functional Partners:
GCA_900078395_03009
Unannotated protein.
 
 
 0.977
GCA_900078395_00208
Unannotated protein.
  
 
 0.964
GCA_900078395_02332
Unannotated protein.
  
 
 0.936
GCA_900078395_00262
Unannotated protein.
  
 
 0.927
GCA_900078395_02692
Unannotated protein.
  
 0.921
GCA_900078395_01980
Unannotated protein.
  
 0.914
GCA_900078395_02258
Unannotated protein.
  
 0.914
GCA_900078395_01943
Unannotated protein.
 
 0.897
GCA_900078395_00253
Unannotated protein.
  
 
 0.885
GCA_900078395_01602
Unannotated protein.
  
 0.882
Your Current Organism:
Anaerotruncus rubiinfantis
NCBI taxonomy Id: 1720200
Other names: A. rubiinfantis, Anaerotruncus sp. MT15, CSUR P2276, strain MT15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.