STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900046475_00145Unannotated protein. (371 aa)    
Predicted Functional Partners:
GCA_900046475_00147
Unannotated protein.
 
 0.999
GCA_900046475_00148
Unannotated protein.
 
 0.997
GCA_900046475_00812
Unannotated protein.
 
 0.995
GCA_900046475_00813
Unannotated protein.
 
 0.993
GCA_900046475_00146
Unannotated protein.
 
 0.990
GCA_900046475_00811
Unannotated protein.
 
 0.989
GCA_900046475_01225
Unannotated protein.
 
 
 
0.863
GCA_900046475_00345
Unannotated protein.
   
 
 0.793
GCA_900046475_01583
Unannotated protein.
    
  0.778
GCA_900046475_00087
Unannotated protein.
   
  0.776
Your Current Organism:
Collinsella ihuae
NCBI taxonomy Id: 1720204
Other names: C. ihuae, CSUR P2019, Collinsella sp. GD8, strain GD8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.