STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_01078Unannotated protein. (473 aa)    
Predicted Functional Partners:
GCA_001486505_02554
Unannotated protein.
   
  0.845
GCA_001486505_01079
Unannotated protein.
 
     0.545
GCA_001486505_01077
Unannotated protein.
       0.487
GCA_001486505_01903
Unannotated protein.
  
  
  0.447
GCA_001486505_03132
Unannotated protein.
  
  
  0.428
GCA_001486505_00541
Unannotated protein.
  
  
  0.427
GCA_001486505_00178
Unannotated protein.
 
  
  0.424
GCA_001486505_01207
Unannotated protein.
 
     0.421
GCA_001486505_04898
Unannotated protein.
    
  0.412
GCA_001486505_01261
Unannotated protein.
   
    0.406
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.