STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_02642Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_001486505_02423
Unannotated protein.
    
 0.923
GCA_001486505_04222
Unannotated protein.
    
  0.788
GCA_001486505_02641
Unannotated protein.
       0.740
GCA_001486505_02643
Unannotated protein.
       0.692
GCA_001486505_02644
Unannotated protein.
    
  0.679
GCA_001486505_02646
Unannotated protein.
       0.604
GCA_001486505_01747
Unannotated protein.
    
  0.548
GCA_001486505_01751
Unannotated protein.
    
  0.522
GCA_001486505_02645
Unannotated protein.
       0.521
GCA_001486505_01750
Unannotated protein.
     
 0.513
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.