STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_04065Unannotated protein. (114 aa)    
Predicted Functional Partners:
GCA_001486505_04907
Unannotated protein.
  
 
 0.877
GCA_001486505_04066
Unannotated protein.
       0.740
GCA_001486505_02833
Unannotated protein.
  
 
 0.695
GCA_001486505_01085
Unannotated protein.
  
 
 0.670
GCA_001486505_04519
Unannotated protein.
  
 
 0.670
GCA_001486505_01821
Unannotated protein.
    
 0.644
GCA_001486505_00654
Unannotated protein.
    
 0.599
GCA_001486505_00268
Unannotated protein.
  
    0.596
GCA_001486505_00122
Unannotated protein.
    
  0.578
GCA_001486505_03668
Unannotated protein.
    
  0.578
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.