STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_04115Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_001486505_04222
Unannotated protein.
 
 0.999
GCA_001486505_04518
Unannotated protein.
  
 0.986
GCA_001486505_02279
Unannotated protein.
   
  
 0.980
GCA_001486505_01749
Unannotated protein.
 
 
 0.946
GCA_001486505_04521
Unannotated protein.
  
 
 0.923
GCA_001486505_03459
Unannotated protein.
 
  
 0.918
GCA_001486505_03413
Unannotated protein.
    
 0.899
GCA_001486505_01751
Unannotated protein.
  
 
 0.897
GCA_001486505_00174
Unannotated protein.
 
 
 0.850
GCA_001486505_00848
Unannotated protein.
 
 
 0.848
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.