STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_04372Unannotated protein. (120 aa)    
Predicted Functional Partners:
GCA_001486505_02593
Unannotated protein.
  
 
 0.890
GCA_001486505_03350
Unannotated protein.
   
 
 0.851
GCA_001486505_03588
Unannotated protein.
   
 
 0.851
GCA_001486505_00030
Unannotated protein.
    
   0.849
GCA_001486505_00064
Unannotated protein.
    
 
 0.849
GCA_001486505_03136
Unannotated protein.
    
   0.843
GCA_001486505_03587
Unannotated protein.
    
   0.843
GCA_001486505_04373
Unannotated protein.
       0.824
GCA_001486505_04374
Unannotated protein.
       0.824
GCA_001486505_04371
Unannotated protein.
       0.782
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.