STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486505_04850Unannotated protein. (1038 aa)    
Predicted Functional Partners:
GCA_001486505_02980
Unannotated protein.
  
     0.766
GCA_001486505_03318
Unannotated protein.
  
     0.764
GCA_001486505_04747
Unannotated protein.
 
     0.745
GCA_001486505_03900
Unannotated protein.
  
     0.712
GCA_001486505_03074
Unannotated protein.
  
     0.704
GCA_001486505_00855
Unannotated protein.
  
     0.678
GCA_001486505_04048
Unannotated protein.
  
     0.673
GCA_001486505_04581
Unannotated protein.
  
     0.667
GCA_001486505_04766
Unannotated protein.
  
  
  0.659
GCA_001486505_04758
Unannotated protein.
  
     0.655
Your Current Organism:
Paenibacillus rubinfantis
NCBI taxonomy Id: 1720296
Other names: CSUR P2076, DSM 101191, P. rubinfantis, Paenibacillus sp. MT18, strain MT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.