STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900018785_01055Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_900018785_01057
Unannotated protein.
 
 
 0.999
GCA_900018785_01056
Unannotated protein.
 
  
 0.967
GCA_900018785_01754
Unannotated protein.
    
 0.951
GCA_900018785_00866
Unannotated protein.
   
 
  0.812
GCA_900018785_01099
Unannotated protein.
     
 0.532
GCA_900018785_01100
Unannotated protein.
     
 0.532
GCA_900018785_00504
Unannotated protein.
   
  
 0.502
GCA_900018785_02372
Unannotated protein.
   
    0.483
GCA_900018785_02478
Unannotated protein.
 
   
 0.475
GCA_900018785_02034
Unannotated protein.
  
    0.466
Your Current Organism:
Xanthomonas massiliensis
NCBI taxonomy Id: 1720302
Other names: CSUR P2129, X. massiliensis, Xanthomonas sp. SN8, strain SN8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.