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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC61109.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (172 aa)    
Predicted Functional Partners:
clpS
Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.956
KIC56201.1
Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.768
KIC61077.1
NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.724
hpf
Ribose-phosphate pyrophosphokinase; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
    0.705
KIC57215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.585
KIC58453.1
Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.581
KIC56069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.550
KIC60863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.536
KIC56849.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.532
KIC56190.1
OsmC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.532
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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