Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIC60352.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)    
Predicted Functional Partners:
KIC57871.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.777
KIC60668.1
PAS fold family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.744
KIC59761.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.691
KIC57578.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.656
KIC57576.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.650
KIC60353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
KIC59703.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.624
KIC56667.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.624
KIC55906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.620
KIC56700.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.614
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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