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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC59717.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
KIC58637.1
Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
KIC60580.1
Response regulator; LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
KIC60668.1
PAS fold family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.714
KIC56647.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.696
KIC59761.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.621
KIC59832.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.614
KIC60578.1
PAS fold family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.605
KIC58818.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.548
KIC58852.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.548
KIC59086.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.534
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.