| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KIC59261.1 | KIC59262.1 | RM53_05885 | RM53_05890 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| KIC59261.1 | KIC59806.1 | RM53_05885 | RM53_05290 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| KIC59261.1 | gatA | RM53_05885 | RM53_14095 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.456 |
| KIC59261.1 | hfq | RM53_05885 | RM53_00375 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.500 |
| KIC59261.1 | rpmE | RM53_05885 | RM53_06320 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.459 |
| KIC59261.1 | rpoA | RM53_05885 | RM53_15995 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.705 |
| KIC59261.1 | rpoB | RM53_05885 | RM53_15790 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.719 |
| KIC59261.1 | rpoZ | RM53_05885 | RM53_05620 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.724 |
| KIC59261.1 | rpsL | RM53_05885 | RM53_15805 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.467 |
| KIC59261.1 | rpsR | RM53_05885 | RM53_06050 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.474 |
| KIC59262.1 | KIC59261.1 | RM53_05890 | RM53_05885 | Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| KIC59806.1 | KIC59261.1 | RM53_05290 | RM53_05885 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
| KIC59806.1 | rpmE | RM53_05290 | RM53_06320 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.459 |
| KIC59806.1 | rpoA | RM53_05290 | RM53_15995 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.705 |
| KIC59806.1 | rpoB | RM53_05290 | RM53_15790 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.719 |
| KIC59806.1 | rpoZ | RM53_05290 | RM53_05620 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.724 |
| KIC59806.1 | rpsL | RM53_05290 | RM53_15805 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.467 |
| gatA | KIC59261.1 | RM53_14095 | RM53_05885 | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
| hfq | KIC59261.1 | RM53_00375 | RM53_05885 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| rpmE | KIC59261.1 | RM53_06320 | RM53_05885 | 50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
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