Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIC58957.1Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)    
Predicted Functional Partners:
KIC59268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.819
KIC58956.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
KIC59267.1
NADH-ubiquinone oxidoreductase subunit 6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.807
KIC59264.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
KIC58082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.542
KIC58954.1
UDP-galactopyranose mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
KIC58955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
KIC56804.1
cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
   
    0.404
KIC58993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.400
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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